Publications

Publications

This list is seeded from representative publication and achievement information on the official Tsinghua profile page for Prof. Guoqiang Yu. It is structured so additional publications can be added over time.

Representative Publications

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Fast, accurate, and versatile data analysis platform for the quantification of molecular spatiotemporal signals

Xuelong Mi, Alex Bo-Yuan Chen, Daniela Duarte, Erin Carey, Charlotte R. Taylor, Philipp N. Braaker, Mark Bright, Rafael G. Almeida, Jing-Xuan Lim, Virginia M. S. Ruetten, Yizhi Wang, Mengfan Wang, Weizhan Zhang, Wei Zheng, Michael E. Reitman, Yongkang Huang, Xiaoyu Wang, Lei Li, HanFei Deng, Song-Hai Shi, Kira E. Poskanzer, David A. Lyons, Axel Nimmerjahn, Misha B. Ahrens, and Guoqiang Yu

Cell

Corresponding author; listed as representative work on the official profile.

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Data science and its future in large neuroscience collaborations

Manuel Schottdorf, Guoqiang Yu, and Edgar Y. Walker

Neuron

Corresponding author; listed as representative work on the official profile.

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Efficient Global Multi-object Tracking Under Minimum-cost Circulation Framework

Congchao Wang, Yizhi Wang, and Guoqiang Yu

IEEE Transactions on Pattern Analysis and Machine Intelligence

Corresponding author; listed as representative work on the official profile.

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SynQuant: An Automatic Tool to Quantify Synapses from Microscopy Images

Yizhi Wang, Congchao Wang, Petter Ranefall, Gerard Joey Broussard, Yinxue Wang, Guilai Shi, Boyu Lyu, Yue Wang, Lin Tian, and Guoqiang Yu

Bioinformatics

Corresponding author; listed as representative work on the official profile.

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Accurate quantification of astrocyte and neurotransmitter fluorescence dynamics for single-cell and population-level physiology

Yizhi Wang, Nicole V. DelRosso, Trisha V. Vaidyanathan, Michelle K. Cahill, Michael E. Reitman, Silvia Pittolo, Xuelong Mi, Guoqiang Yu, and Kira E. Poskanzer

Nature Neuroscience

Corresponding author; listed as representative work on the official profile.

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muSSP: Efficient Min-cost Flow Algorithm for Multi-object Tracking

Congchao Wang, Yizhi Wang, Yinxue Wang, Chiung-Ting Wu, and Guoqiang Yu

Advances in Neural Information Processing Systems

Corresponding author; listed as representative work on the official profile.

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ConvexVST: A Convex Optimization Approach to Variance-stabilizing Transformation

Mengfan Wang, Boyu Lyu, and Guoqiang Yu

International Conference on Machine Learning

Corresponding author; listed as representative work on the official profile.

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Graphical Time Warping for Joint Alignment of Multiple Curves

Yizhi Wang, David J. Miller, Kira Poskanzer, Yue Wang, Lin Tian, and Guoqiang Yu

Advances in Neural Information Processing Systems

Corresponding author; listed as representative work on the official profile.

Conference Publications

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Joint Thresholding: An adaptive thresholding approach considering the consistency of high-dimensional fluorescence imaging data

Mengfan Wang and Guoqiang Yu

IEEE 21st International Symposium on Biomedical Imaging

Corresponding author.

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PrinCut-Auto: an unsupervised 3D cell detection tool for embryonic data

Wei Zheng, Boyu Lyu, Xuelong Mi, James Cheng Peng, Yizhi Wang, Mengfan Wang, Zuolin Cheng, Shuoxuan Qiao, Zeyuan Hou, and Guoqiang Yu

IEEE 21st International Symposium on Biomedical Imaging

Corresponding author.

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NIS3D: A Completely Annotated Benchmark for Dense 3D Nuclei Image Segmentation

Wei Zheng, Cheng Peng, Zeyuan Hou, Boyu Lyu, Mengfan Wang, Xuelong Mi, Shuoxuan Qiao, Yinan Wan, and Guoqiang Yu

Advances in Neural Information Processing Systems

Corresponding author.

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BILCO: An Efficient Algorithm for Joint Alignment of Time Series

Xuelong Mi, Mengfan Wang, Alex Bo-Yuan Chen, Jing-Xuan Lim, Yizhi Wang, Misha Ahrens, and Guoqiang Yu

Advances in Neural Information Processing Systems

Corresponding author.